Publications of Franziska Hufsky

Hufsky, F.; Scheubert, K.; Böcker, S.: Computational mass spectrometry for small-molecule fragmentation. Trends in Analytical Chemistry 53, pp. 41 - 48 (2014)

Hufsky, F.; Dührkop, K.; Rasche, F.; Chimani, M.; Böcker, S.: Fast alignment of fragmentation trees. Bioinformatics 28, pp. i265 - i273 (2012)

Hufsky, F.; Rempt, M.; Rasche, F.; Pohnert, G.; Böcker, S.: De novo analysis of electron impact mass spectra using fragmentation trees. Analytica Chimica Acta 39, pp. 67 - 76 (2012)

Rasche, F.; Scheubert, K.; Hufsky, F.; Zichner, T.; Kai, M.; Svatoš, A.; Böcker, S.: Identifying the unknowns by aligning fragmentation trees. Analytical Chemistry 84 (7), pp. 3417 - 3426 (2012)

Ullmann-Zeunert, L.; Muck, A.; Wielsch, N.; Hufsky, F.; Stanton, M.; Bartram, S.; Böcker, S.; Baldwin, I. T.; Groten, K.; Svatoš, A.: Determination of ¹⁵N-incorporation into plant proteins and their absolute quantitation: a new tool to study nitrogen flux dynamics and protein pool sizes elicited by plant-herbivore interactions. Journal of Proteome Research 11 (10), pp. 4947 - 4960 (2012)

Hufsky, F.; Kuchenbecker, L.; Jahn, K.; Stoye, J.; Böcker, S.: Swiftly computing center strings. BMC Bioinformatics 12, 106 (2011)

Scheubert, K.; Hufsky, F.; Rasche, F.; Böcker, S.: Computing fragmentation trees from metabolite multiple mass spectrometry data. Research in Computational Molecular Biology 6577, pp. 377 - 391 (2011)

Scheubert, K.; Hufsky, F.; Rasche, F.; Böcker, S.: Computing fragmentation trees from metabolite multiple mass spectrometry data. Journal of Computational Biology 18 (11), pp. 1383 - 1397 (2011)

Hufsky, F.; Böcker, S.: Comparing fragmentation trees from electron impact mass spectra with annotated fragmentation pathways. In: Proceedings of German Conference on Bioinformatics, pp. 12 - 22. German Conference on Bioinformatics, Jena, Germany, September 20, 2012 - September 22, 2012. Leibniz-Zentrum für Informatik, Dagstuhl, Germany (2012)

Ludwig, M.; Hufsky, F.; Elshamy, S.; Böcker, S.: Finding characteristic substructures for metabolite classes. In: Proceedings of German Conference on Bioinformatics, pp. 23 - 38. German Conference on Bioinformatics, Jena, Germany, September 20, 2012 - September 22, 2012. Leibniz-Zentrum für Informatik, Dagstuhl, Germany (2012)

Hufsky, F.; Kuchenbecker, L.; Jahn, K.; Stoye, J.; Böcker, S.: Swiftly computing center strings. In: Proceedings of Workshop on Algorithms in Bioinformatics, Vol. 6293, pp. 325 - 336. (2010)